BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C02LP1|AL428179
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1057 1707 0.0
>3x_Contig1057
Length = 3069
Score = 1707 bits (860), Expect = 0.0
Identities = 864/866 (99%)
Strand = Plus / Plus
Query: 5 cagcatcttcagaactcttcagctgctgtaaaaaatcaagtgcttgtttcttcaaatcat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 cagcatcttcagaactcttcagctgctgtaaaaaatcaagtgcttgtttcttcaaatcat 206
Query: 65 ttccagcggtagaagaattggcaatatcgaccgcctgctggatatgtgacataccttctt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ttccagcggtagaagaattggcaatatcgaccgcctgctggatatgtgacataccttctt 266
Query: 125 cttcttcttcttcttcttctgaatttcaaataaatactaagtccttgtccccctggcttg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cttcttcttcttcttcttctgaatttcaaataaatactaagtccttgtccccctggcttg 326
Query: 185 ccactgagcggatccaaaaccgaactctatatatatcgtttgaatttccgttctctaatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccactgagcggatccaaaaccgaactctatatatatcgtttgaatttccgttctctaatg 386
Query: 245 aaacttgtatgtttaacacaaaagaaagtaaaacagataaaacagaacgctttcttctca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aaacttgtatgtttaacacaaaagaaagtaaaacagataaaacagaacgctttcttctca 446
Query: 305 gtactccctctgaatctatactcccgggctctatacactcttgccgctgggatcctgagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gtactccctctgaatctatactcccgggctctatacactcttgccgctgggatcctgagt 506
Query: 365 ccttaatcagtgttttacagttcaatttctcgccttgttgatctgtcaatgtgtattctt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ccttaatcagtgttttacagttcaatttctcgccttgttgatctgtcaatgtgtattctt 566
Query: 425 gaattgtgttaacattggaaatgcttagatgctcatcaaaatttttcagtacataagaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaattgtgttaacattggaaatgcttagatgctcatcaaaatttttcagtacataagaga 626
Query: 485 gtagggtaacgatatttgaattccagcgacaggcagttagttactcatagtctggagttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtagggtaacgatatttgaattccagcgacaggcagttagttactcatagtctggagttg 686
Query: 545 actcatacacaggatatacttactagtcttatataccagtgttgtatagatattctttca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 actcatacacaggatatacttactagtcttatataccagtgttgtatagatattctttca 746
Query: 605 attgggcgaatgctctgccacgctgagagattttgttcttgtcttctttagccatttcgg 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 attgggcgaatgctctgccacgctgagagattttgttcttgtcttctttagccatttcgg 806
Query: 665 catacgtttcgttgttttgtgattcatccggttggaagatggaatcccaaccgaaattgg 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 catacgtttcgttgttttgtgattcatccggttggaagatggaatcccaaccgaaattgg 866
Query: 725 tgtgacctctactgtcaacgatggttccgtgagtcttaccttggaatacgtgtaattggc 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 tgtgacctctactgtcaacgatggttccgtgagtcttaccttggaatacgtgtaattggc 926
Query: 785 ccttagagtcagcgtatgcgatcgtagtgatcgcgtatgsccctttattctcgaatgaat 844
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 927 ccttagagtcagcgtatgcgatcgtagtgatcgcgtatgcgcctttattctcgaatgaat 986
Query: 845 cgagcattttcacgactttggcaagc 870
||||||||||||||||||||||||||
Sbjct: 987 cgagcattttcacgactttggcaagc 1012
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9228
Number of Sequences: 1807
Number of extensions: 9228
Number of successful extensions: 658
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)